Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTVKTVRELRAAVARA-RSEGKRIGFVPTMGNLHAGHAALVKKAGE-RADFVVVSIFVNPLQFGPSEDLDTYPRTLAADQERLLEAGCHLLFTPTVEEMYPDGMDGQTRIHVPGVSEGLCGASRPGHFEGVATVVSKLLNMVQPDLALFGEKDFQQLAVIRKLVRDLNLPVQIFGEPTVRAADGLALSSRNGYLDEQQRAAAPAIYRTLRQLGERIRAGAEDFPALLADARQALEQAGLRPDYLEIREPISLRPGVPGDRQLVILAAAYLGSTRLIDNLSVHLD |
4EF6 Chain:B ((21-287)) | -----------ADVSRALRLTGRRVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQ-----------RTPDDDLAQLRAEGVEIAFTPTTAAMYPDGL--RTTVQPGPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNRYLDPAQRAAAVALSAALTAAAHAATAGAQAALDAARAVLDA--APGVAVDYLELRD-IGLGP-MPLNGSGRLLVAARLGTTRLLDNIAIEI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165258 for 2053 contacts (-80.5/contact) +
2D Compatibility (PS) -28333 + (NN) -17097 + (LL) 728
1D Compatibility (HY) -21200 + (ID) 6300
Total energy: -237460.0 ( -115.66 by residue)
QMean score : 0.549
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