Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRDLTDDVALMRPVIDALRASGCDPDRVLVRVGLPPGGLPAGRFPHSAQNLFWKAAADECGEEHVGLHLAEHLPAFHGLLLEYLFLSSDTFGAGLRHSLRYVRLLSDTLQAQLEVEGERAVLSLGESPAINRHFPEMLAGAVIRLFGALTEGEFKPLEVQLMNETGAPMERYRAVYGCPTILGMPRYALVFDAAVLDKPSRHAAPELLRMHESLARRQLAEVERLDLVRQVRELIGELLVDGGATLEQVAARL-GMPARRLRERLAMA-GVRFNDLVTDYRCRLAKELLLKTDERIEVIVERTGFSEPSTFYRAFKRWVGETPVEFRRRGQQGRG |
3OTD Chain:A ((3-269)) | -KSKFEYVRDFEADDTCLAHC-----WVVVRLDGRN-------FHRFAEKHNFAKPNDSRALQLMTKCAQTVMEELEDIVIAYGQ-------------------------------SDEYSFVFKRKTNWFKRRASKFMTHVASQFASSYVFYWRDYFEDQPLLYPPG----------------------FDGRVVVYPSNQTLKDYLSWRQADCHINNLYNTVFWALIQ----------QSGLTPVQAQGRLQGTLAADKNEILFSEFNINYNNE--------------LPMYRKGTVLIWQTKPVPL-----HCDIIGDAFWKEHPEILDEDS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3OTD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -71952 for 1759 contacts (-40.9/contact) +
2D Compatibility (PS) -25536 + (NN) -11417 + (LL) 7092
1D Compatibility (HY) -2000 + (ID) 1550
Total energy: -105363.0 ( -59.90 by residue)
QMean score : 0.365
|
|
|