Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRDLTDDVALMRPVIDALRASGCDPDRVLVRVGLPPGGLPAGRFPHSAQNLFWKAAADECGEEHVGLHLAEHLPAFHGLLLEYLFLSSDTFGAGLRHSLRYVRLLSDTLQAQLEVEGERAVLSLGESPAINRHFPEMLAGAVIRLFGALTEGEFKPLEVQLMNETGAPMERYRAVYGCPTILGMPRYALVFDAAVLDKPSRHAAPELLRMHESLARRQLAEVERLDLVRQVRELIGELLVDGGATLEQVAARL-GMPARRLRERLAMA-GVRFNDLVTDYRCRLAKELLLKTDERIEVIVERTGFSEPSTFYRAFKRWVGETPVEFRRRGQQGRG
3OTD Chain:A ((3-269))-KSKFEYVRDFEADDTCLAHC-----WVVVRLDGRN-------FHRFAEKHNFAKPNDSRALQLMTKCAQTVMEELEDIVIAYGQ-------------------------------SDEYSFVFKRKTNWFKRRASKFMTHVASQFASSYVFYWRDYFEDQPLLYPPG----------------------FDGRVVVYPSNQTLKDYLSWRQADCHINNLYNTVFWALIQ----------QSGLTPVQAQGRLQGTLAADKNEILFSEFNINYNNE--------------LPMYRKGTVLIWQTKPVPL-----HCDIIGDAFWKEHPEILDEDS


General information:
TITO was launched using:
RESULT:

Template: 3OTD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71952 for 1759 contacts (-40.9/contact) +
2D Compatibility (PS) -25536 + (NN) -11417 + (LL) 7092
1D Compatibility (HY) -2000 + (ID) 1550
Total energy: -105363.0 ( -59.90 by residue)
QMean score : 0.365

(partial model without unconserved sides chains):
PDB file : Tito_3OTD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OTD-query.scw
PDB file : Tito_Scwrl_3OTD.pdb: