Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLVTAIIKPFKLDDVRESLSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVKIDVAIADDQLDRVIEAITKAANTGKIGDGKIFVVNLEQAIRIRTGETDTDAI
3T9Z Chain:B ((1-108))
MKMVVAVIRPEKLECVKKALEERGFVGMTVTEVKGRG---------------VDLLQKTKVEVVVSDDAVDEVVEAIVSSARTGKFGDGRIFVIPVEKSVKIRTGDEE----
General information:
TITO was launched using:
RESULT:
Template:
3T9Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55419 for 602 contacts (-92.1/contact) +
2D Compatibility (PS) -10369 + (NN) -1734 + (LL) 1364
1D Compatibility (HY) -10400 + (ID) 2450
Total energy: -79008.0 ( -131.24 by residue)
QMean score : 0.666
(partial model without unconserved sides chains):
PDB file :
Tito_3T9Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T9Z-query.scw
PDB file :
Tito_Scwrl_3T9Z.pdb
: