Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKRYIDSKKENRVDFILRNHGMSVIIMAVIMFLPPVAISVLYFFDIYDQHTNIEINLLVSTLVTLFIVYNVKHYRYLLNIIEFQNAIFANALNHNTEFCLILHKNEDVVYADARFYERFKDYIDNDVTLGKILEVGDISEKDKKALYQALKNNSSVQVRIVLSKKSRISSFLLLCEPIPDNPQIAINSNKILNLSLAPIARPHGYFVLKATQMNKEQVYEELIEKHNIGTYIANTKGIILSVNKRFLDMFELKKLEKGSSINDFIFQSKYNNVATDNNILFFTVNGVPFKAYMSTAMFCDKHHHSYIYGLITPVESNVIDYQLHPCFANSSIAIAQCDVNGSFIKKNTALIKLAGPDNSSIFTLISDDYHMKIREYFLSNRINNASFDVQLNNNDNMKIYFNKFLHNRMMFILCYFVDNTEHKNLEIKLEHYQKMQA-----IGQLAGGIAHDFNNILTGIIGFCDLLLLQHSAGDPSFGDIIQIQQNAKRGSNLVKQLLAFSRRQTMQPKIIDVNSTIANLCEMIKRLI--GENIKFTTYYGRDLGMVRADQGQLEQVILNLAVNASAAMEKGGELTIRTFNKKIDSLNSTPQGMFSPDKEAIEHGNYVMIEVIDTGCGMVSDTVEKVFDPFFSTKDITSGTGLGLSTVYGIIKQTEGYIYVASEVNCGTKFSIFLPMVYISDENHREKGSEEIEKPVVNEVKDNGIILLIEDEDSVREFITKALKRKGFDVIEASMGSKALEIISKKNQHIDLIITDVIMPEVSGPEIVKEALIHRPDINVIFISGYTEDAFLKNDNINIEDFHFLPKPFTLSELGNKVQSVLHKAKKAV |
1JM6 Chain:A ((11-374)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASLAGAPKYIEHF-SKFSPSPLSMKQFLDFGACEKTSFTFLRQELPVRLANIMKEIN----LLPDRVLSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIRNRHNDVVPTMAQGVLEYDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFDPKHIGS--------IDPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEIQEVNATNATQPIHMVYVPSHLYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEE---------------DLSIKMSDRGGGVPLRKIERLFSYMYSTAPTPAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVERLPVY--------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JM6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111035 for 2639 contacts (-42.1/contact) +
2D Compatibility (PS) -34708 + (NN) -5610 + (LL) 37412
1D Compatibility (HY) -6400 + (ID) 2450
Total energy: -122791.0 ( -46.53 by residue)
QMean score : ?
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