Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMERISWNQYFMAQSHLLALRSTCPRLSVGATIVRDKRMIAGGYNGSIAGGVHCADEGCLMI------------------DDHCARTIHAEMNAILQCSKFGVPTDGAEIYVTHYPCIQCCKSIIQAGIKTVYYAEDYKTH-PYAQELFEQAGVTVEQVELDEMIVDLKNREKLSFVAGLIGKLADAGLAEEELKKIHEQANTLFTSYV
1VQ2 Chain:A ((1-177))----MKASTVLQIAYLVSQESKCCSWKVGAVIEKNGRIISTGYNGSPAGGVNCCDYAAEQGWLLNKRFVLAKEHRSAHSEWSSKNEIHAELNAILFAAENGSSIEGATMYVTLSPCPDCAKAIAQSGIKKLVYCETYDKNKPGWDDILRNAGIEVFNVPKK-----------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1VQ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 686 -26431 -38.53 -191.53
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -38.53
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.548

(partial model without unconserved sides chains):
PDB file : Tito_1VQ2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VQ2-query.scw
PDB file : Tito_Scwrl_1VQ2.pdb: