Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLLLAALLTAGVTAHSISTRAVWQFRNMIKCTIPGSDPLREYNNYGCYCGLGGSGTPVDDLDRCCQTHDHCYNQAKKLESCKFLIDNPYTNTYSYKCSGNVITCSDKNNDCESFICNCDRQAAICFSKV--PYNKEYKDLDTKKHC
2G58 Chain:A ((1-115))
----------------------SLLEFGKMILEET-GKLAIPSYSSYGCYCGWGGKGTPKDATDRCCFVHDCCYGNL---PDC-----NPKSDRYKYKRVNGAIVCE-KGTSCENRICECDKAAAICFRQNLNTYSKKYMLYPDF-LC
General information:
TITO was launched using:
RESULT:
Template:
2G58.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55576 for 833 contacts (-66.7/contact) +
2D Compatibility (PS) -12323 + (NN) -9460 + (LL) 3024
1D Compatibility (HY) -9200 + (ID) 2450
Total energy: -85985.0 ( -103.22 by residue)
QMean score : 0.394
(partial model without unconserved sides chains):
PDB file :
Tito_2G58.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G58-query.scw
PDB file :
Tito_Scwrl_2G58.pdb
: