Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
FIFLALLGAAVAFPVDDDDKIVGGYTCGANTVPYQVSLNS-GYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGS-GCAQKNKPGVYTKVCNYVSWIKQTIASN
2QXI Chain:A ((1-223))
--------------------IIDGAPCARGSHPWQVALLSGNQLHCGGVLVNERWVLTAAHCKMNEYTVHLGSDTLG--DRRAQRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKKVRLPSRCEPPGTTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKVYKDLLENSMLCAGIPDSKKNACNGDSGGPLVCRGTLQGLVSWGTFPCGQPNDPGVYTQVCKFTKWINDTMKKH
General information:
TITO was launched using:
RESULT:
Template:
2QXI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133812 for 1912 contacts (-70.0/contact) +
2D Compatibility (PS) -24256 + (NN) -11330 + (LL) 1920
1D Compatibility (HY) -20400 + (ID) 4850
Total energy: -192728.0 ( -100.80 by residue)
QMean score : 0.686
(partial model without unconserved sides chains):
PDB file :
Tito_2QXI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QXI-query.scw
PDB file :
Tito_Scwrl_2QXI.pdb
: