Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQAVKVERRETLKQKPNTSQLGFGKYFTDYMLSYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAYKRDGEVALFRPEENFKRLNNS--LARLEMPQVDEAELLEGLKQLVDIERDWIPEGEGQSLYIRPFVFATEGALGVG--ASHQYKLLIILSPSGAYYGGETLKPTKIYVEDEYVRAVRGGV-GFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLYDVYTGIQNGTLEDKNGWRVVVPKY |
| 2EIY Chain:A ((9-301)) | ------------------------------------------WMNGAFVPQEEAKTSVLSHALHYGTSVFEGIRAYETAKGPAIFRLKEHVKRFYNSAKVLRMEIPFAPE-ELEEAIKEVVR-------RNGYRSCYIRPLAWMGAKALGVNPLPNNPAEVMVAAWEW--------VRKGARLITSSWARFPANVMPGKAKVGGNYVNSALAKMEAVAAGADEALLLD--EEGYVAEGSGENLFFVRDGVIYALE-HSVNLEGITRDSVIRIAKDLGYEVQVVRATRDQLYMA------DEVFMTGTAAEVTPVSMIDWRP----IGKGTAGPVALRLREVYLEAVTGRRPEYEGW------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102690 for 2315 contacts (-44.4/contact) +
2D Compatibility (PS) -30647 + (NN) -13065 + (LL) 4708
1D Compatibility (HY) -17200 + (ID) 5000
Total energy: -163894.0 ( -70.80 by residue)
QMean score : 0.482
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