Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNTRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHYIFNLPN-NEGLSSLLLNWSTYQDSIISTEIQDLDVLTSGPIPPNPSELITSRAFANLYDTLLMNYNFVIIDTPPVNTVTDAQLFSKFTGNVVYVVNSENNNKDEVKKGKELIEATGAKLLGVVLNRMPKDKSASYYAYYGTDES
1G3Q Chain:A ((2-176))
----------------------------------------GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANLSLVLGVDDPDVTLHDVLAGEANVEDAIYMTQFDNVYVLPGAVDWEHV-LKADPRKLPEVIKSLKDKFDFILIDCPAGLQLD-AMSAMLSGEEALLVTNPEISCLTDTMKVGIVLKKAGLAILGFVLNRYGRS--------------
General information:
TITO was launched using:
RESULT:
Template:
1G3Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78177 for 1532 contacts (-51.0/contact) +
2D Compatibility (PS) -19100 + (NN) -9752 + (LL) 2544
1D Compatibility (HY) -10400 + (ID) 2200
Total energy: -117085.0 ( -76.43 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_1G3Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G3Q-query.scw
PDB file :
Tito_Scwrl_1G3Q.pdb
: