Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESVKTVKTNKVGKNTETANTEASKETHFKQASAITNTLRSIGGIFTKIAKKVRELVKKHPKKSSVALVVLTHIACKRAKELDDKVQDKSKQAEKENQINWWKYSGLTIAASLLLAACSTGDIDKQIELEQEKKEANKSGIKLEQERQKTEQERQKTNKSEIELEQERQKTNKSGIELANSQIKAEQERQKTEQEKQKANKSEIELEQQKQKTINTQRDLIKEQKDFIKETEQNCQEKHGQLFIKKARIKTGITTGIAIEIEAECKTPKPAKTNQTPIQPKHLPNSKQPRSQRGSKAQELIAYLQKELESLPYSQKAIAKQVDFYKPSSIAYLELDPRDFKVTEEWQKENLKIRSKAQAKMLEMRNPQAHLPTSQSLLFVQKIFADINKEIEAVANTEKKTEKAGYGYSKRM |
1QVT Chain:E ((62-120)) | ------------------------------------------------------------------------------------------------------------------------------------------------QEQWKKEQIKCKTNREKFYLYNELSLTTEYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWSINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLS---------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QVT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 37981 for 296 contacts (128.3/contact) +
2D Compatibility (PS) -6641 + (NN) -3735 + (LL) 21344
1D Compatibility (HY) -2000 + (ID) 1050
Total energy: 45899.0 ( 155.06 by residue)
QMean score : 0.495
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