Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKHYDYIAIGGGSGGIASINRAAMHGAKCAL---IEPK------FLGGTCVNVGCVPKKVMWYGAQIKEAMDLYADAYGYQVDAS---FNFQKLVENREAYIERIRGSYKNGLDNNNVDWIKGYAEF-------VDEKTLRVNGELVTADHILIATGGEPALPSIPGA-EFGITSDGFFALKELPKKVAVVGAGYIAVELAGVLQQLGSETHLFVRKHAPLRNFDPLLTDTLTEIIEQSDMTLHKHAIPQKV--------EKNPDGSLTLS--LEDGRT--ETVDTLIWAIGRKPVIKGLQIEKSGVELLESGHIAVDKFQNTNVAGIYAVGDVT-GHYELTPVAIAAGRRLSERLFNNKKDAHLNYENIPTVVFSHPAIGTVGLTEPEAIEKYGKENIKVYTSSFTSMYTAITDHREP--CRMKLICE-GKTERVIGLHGIGYGVDEMIQGFAVAINMGATKADFDNTVAIHPTGSEEFVTMK |
| 4LA1 Chain:A ((132-587)) | ----------------------AAKYGAKIAVLDYVEPTPMGTTWGLGGTCVNVGCIPKKLMHQAGLLSHSLE-DAQHFGWSLDKSEISHDWSTMVEGVQSHIGSLNWGYKVSLRDNAVTYLNARGMLLSPHEVQITEKNKKVS--TITGNKIILATGERPKYPEIPGAIEYGITSDDLFSLPYFPGKTLVVGASYVALKCAGFLASLGGDVTVMVRS-ILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEITQLKPVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKLNCEAVGVKLDKNGRVVCSDDEQTTVSNIYAIGDINAGKPQLTPVAIHAGRYLARRLFAGATEL-TDYSNVATTVFTPLEYGACGLSEEDAIEKYGDNDIEVYHSHFKPLEWTVA-HREDNVCYMKLVCRISDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKEDFDRTIGIHPTCSETFTTL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LA1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222102 for 3299 contacts (-67.3/contact) +
2D Compatibility (PS) -44549 + (NN) -1666 + (LL) 920
1D Compatibility (HY) -40000 + (ID) 8800
Total energy: -316197.0 ( -95.85 by residue)
QMean score : 0.437
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