Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LNVRANRVSEQMKKELGDILNRKIKDPRLGFVTVTGVDVTGDLQEAKVFISILGTDKEKENTLLALAKAHGFIRSEIGRRIRLRKVPEMSFEIDNSIAYGNRIDELLRDLNNDQ
3U51 Chain:A ((91-146))
-----------------------------------------------------------------------FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL----
General information:
TITO was launched using:
RESULT:
Template:
3U51.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9170 for 163 contacts (-56.3/contact) +
2D Compatibility (PS) -3768 + (NN) 3075 + (LL) 4868
1D Compatibility (HY) -4400 + (ID) 650
Total energy: -10045.0 ( -61.63 by residue)
QMean score : 0.316
(partial model without unconserved sides chains):
PDB file :
Tito_3U51.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U51-query.scw
PDB file :
Tito_Scwrl_3U51.pdb
: