Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VTYKITSLAGDGIGPEIMTSGLQVLEAVAKKYNHTFEIESHPFGGAGIDVAQDPIPSSTLKACQ-DADAILLGAIGGPKWDNAPKRPEDGLLALRKALGLFANIRPIQVPSSITHLSPLKKEIVENTDFVVVRELTGGLYFGEPKHWDESAAVDSLTYTRAEIE----RIIEKAFEIAATRNK-------------KVTSVDKANVLA-SSKLWRKIAEEVASRHPD---ITLEHLYIDAAAMLMIQRPTTFDVIVTENLFGDILSDEASVITGSLGMLPSASHAENGPSLYEPIHGSAPDIANQNIANPMSMISSVSMMLRQSFSLFKEADAIDAAATRTMQAGFLTADLGGNTTTTDFTNEVLKQIEGGE |
| 3TY3 Chain:B ((16-363)) | -------IPADGIGKEVVPAARRLMENLPAKHKLKFDFIDLDAGWGTFE---KALPERTVERLKTECNAALFGAVQSPTHKVAGY--SSPIVALRKKMGLYANVRPVK------SLDGAKGKPV---DLVIVRENTECLYVKEERMVQNTPGKRVAEAIRRISEEASTKIGKMAFEIAKSRQKIRESGTYSIHKKPLVTIIHKSNVMSVTDGLFRESCRHAQSLDPSYASINVDEQIVDSMVYRLFREPECFDVVVAPNLYGDILSDGAASLIGSLGLVPSANVGDNF-VMSEPVHGSAPDIAGRGIANPVATFRSVALMLEFMGHQDAAADIYTAVDKVLTEGKVLTPDLGGKSGTNEITDAVLAN----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TY3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122250 for 2746 contacts (-44.5/contact) +
2D Compatibility (PS) -35528 + (NN) -18665 + (LL) 1300
1D Compatibility (HY) -22000 + (ID) 5650
Total energy: -202793.0 ( -73.85 by residue)
QMean score : 0.374
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