Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MIKERVIIVGSGISGCTAALRLMQDYDVTIITKGYKEESNSMLAQGGVAAAVSKNDTPKKHFSDTFQAGCFHNKVLAVNQLVTHGPMVIQKLIAEGMAFDEQDGELALGLEGAHQLPRILHTGGDQTGKFLTTFLQEKLT---DIHWQEQKMAIEIIKQNDS---------AIGVHCLD-KENRLHTYYGEHIILASGGLGQLFPVTTNAATISGDGLALAYRAGAKLTDMEFIQFHPTLLFLNGRCHGLISEAVRGEGAKLIRADGSAIMTDVHPRADLAPRDIVAATLFAEIQDGN--EVFLDITAI--PNFEKRFPGITANLDAHHIPFRETKRIPVHPGAHFLMGGIRTDLSGKTNIPGLYAIGEVANAGVHGANRLASNSLLETLVFGEKVAEYIRTQKINPIDHPEIPLSNQIQTPHLPDKQLL---------QEKIWETLGITRKPEKITEFLHWLTDFDYA--------NHTRKTAEISHMLITAKLIAESALKRTESLGAH----------RILKGVIK- |
| 1CHU Chain:A ((2-533)) | NTLPEHSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEFDE-------------TDSIDSHVEDTLIAGAGICDRHAVEFVASNARSCVQWLIDQGVL----------------------------------TTLVSKALNHPNIRVLERTNAVDLIV--SDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEFNQFHPTALYHPQARNFLLTEALRGEGAYLKRPDGTRFMPDFDERGELAPRDIVARAIDHEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLG-LGIDLTQEPVPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRMHDISTLPPWDESRVEN-----PDERVVIQHNWHELRLFMWDYVGIVRTTKRLERALRRITMLQQEIDEYYAHFRVSNNLLELRNLVQVAELIVRCAMMRKESRGLHFTLDYPELLTHSGPSILSP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CHU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240450 for 3738 contacts (-64.3/contact) +
2D Compatibility (PS) -45221 + (NN) -3467 + (LL) 2724
1D Compatibility (HY) -22800 + (ID) 7250
Total energy: -316464.0 ( -84.66 by residue)
QMean score : 0.466
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