Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLTEMLQIKYPILQGAMAQIATYELASAVSNAGGLGIIASGG-MSADALREQIRLCKEKTTKPFAVNIMLMMP----NCPELVDVIIEEDVRVVTTGAGTPKPFMEKFKAAGIKVIAVIPSVKIAQKMEEIGVDAVVAEGTEAGGHVGE--TTTMALVRQVVSAVNIPVIAAGGIADGHGMAAVYALGASGVQIGTLFLVAEECPVPASFKQAVLDATDTSTTVTGRRNGAPVRSIKNPMIQKYVELENENASRDKLE-ELTL-GSLRKAVHEGDVENGSVMAGQICGMLTEIRSTSDIIENLMKESKQVASNLVIQ |
| 2GJL Chain:A ((6-320)) | TRFTETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGNDPGEHIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMGTRFLATRECPIHPAVKAAIRAADERSTDLIMRSLRNTARVARNAISQEVLAIEARGGAGYADIAALVSGQRGRQVYQQGDTDLGIWSAGMVQGLIDDEPACAELLRDIVEQARQLVRQR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GJL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -238145 for 2761 contacts (-86.3/contact) +
2D Compatibility (PS) -33169 + (NN) -10997 + (LL) 516
1D Compatibility (HY) -14800 + (ID) 4900
Total energy: -301495.0 ( -109.20 by residue)
QMean score : 0.582
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