Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWYTAEP-----ASDFYHKYPVDLALAEEYGVNGIRISIAWSRIFPTG--YGEVNLKGVEFYHKLFEECHKRHVEPFVTLHHFDTPEALHS--NGDFLNRDNIEHFVNYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPGIQYDLAK-----------VFQSHHNMMVSHARAVKLYKDK---GYKGEIGVVHALPTKYPLDPENSADVRAAELEDIIHNKFILDATYLGYYSEMTMAGVKHILKENGGELDLREEDFQALEAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVPKTDWDWI-IYPQGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNTV------YDDGRIDYVKQHLEVLSEAISDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDF-ETQERYPKKSAHWYKQVAKTQIIE |
| 3PTM Chain:A ((32-501)) | --RSFPKGFIFGTASSSYQYEGGAAEGGRGPSIWDTFTHQHPEKIADRSNGDVASDSYHLYKEDVRLMKDMGMDAYRFSISWTRILPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFITLFHWDSPQALEDKYNG-FLSPNIINDFKDYAEICFKEFGDRVKNWITFNEPWTFCSNGYATGLFAPGRCSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRLYKAKYQALQKGKIGITLVSHWFVPFSRSKSNNDAAKRAIDFMFGWF-MDPLIRGDY-PLSMRGLV------GNRLPQFTKEQSKL--VKGAFDFIGLNYYTANYADNLPPS-----NGLNNSYTTDSRANLTGVRNGIPIGPQAASPWLYVYPQGFRDLLLYVKENYGN-PTVYITENGV---DEFNNKTLPLQEALKDDARIEYYHKHLLSLLSAIRDGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFKKFLLK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PTM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138480 for 3878 contacts (-35.7/contact) +
2D Compatibility (PS) -46558 + (NN) -17917 + (LL) 2256
1D Compatibility (HY) -28800 + (ID) 8700
Total energy: -238199.0 ( -61.42 by residue)
QMean score : 0.670
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