Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGGKFQKNLKKSVVLNRWMNVGLILLFLVGLLITSYPFISNWYYNIKANNQVTNFDNQTQKLNAKEINRRFELAKAYNRTLDPSRLSDPYTEKE-KKGIAEYAHMLEITEMIGYIDIPSIKQKLPIYAGTTSSVLEKGAGHLEGTSLPIGGKSSHTVITAHRGLPKAKLFTDLDKLKKGKIFYIHNIKEVLAYKVDQISVVKPDNFSKLLVVKGKDYATLLTCTPYSINSHRLLVRGHRIKYVPPVKEKNYLMKELQTHYKLYFLLSILVILILVALLLYLKRKFKERKRKGNQK |
| 2W1J Chain:A ((4-198)) | -------------------------------------------------QQIADFDKEKATLDEADIDERMKLAQAFNDSLNNVVSGDPWSEEMKKKGRAEYARMLEIHERMGHVEIPVIDVDLPVYAGTAEEVLQQGAGHLEGTSLPIGGNSTHAVITAHTGLPTAKMFTDLTKLKVGDKFYVHNIKEVMAYQVDQVKVIEPTNFDDLLIVPGHDYVTLLTCTPYMINTHRLLVRGHRIPYVA--------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2W1J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -81089 for 1574 contacts (-51.5/contact) +
2D Compatibility (PS) -20909 + (NN) -6850 + (LL) 9108
1D Compatibility (HY) -22000 + (ID) 5850
Total energy: -127590.0 ( -81.06 by residue)
QMean score : 0.482
|
|
|