Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIATEAVMKQEVYQVNGMNLWYGQHHALKNINLSIYENEVTAIIGPSGCGKSTFIKTLNLMIQM-TPNVKLAGELNYNGSNILKDKVDIVDLRKNIGMVFQKGNPFPQSIFDNVAYGPRVHGTKNKKKLQ--EIVEKSLKDVALWDEVKDRLHTSALSLSGGQQQRLCIARALATNPDILLMDEPTSALDPISTRKIEELILELKDKYTIVIVTHNMQQAARVSDQTAFFYMGELVECDNTNKMFSNPKDQRTLDYISGKFG
3VX4 Chain:D ((51-248))----------------------------LSDINLSIKKGSKVSLVGASGSGKTTLAK---LIVNFYEPN---KGIVRINGNDL--KVIDKTALRRHISYLPQQAYVFSGSIMDNLVLGAK-EGTSQEDIIRACEIAEIR-SDIEQMPQGYQTELSDGAGISGGQKQRIALARALLTQAPVLILDAATSSLDILTEKKIISNLLQMTEK-TIIFVAHRLSISQR-TDEVIVMDQGKIVE-------------------------


General information:
TITO was launched using:
RESULT:

Template: 3VX4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 919 -32470 -35.33 -166.51
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain D : 0.74

3D Compatibility (PKB) : -35.33
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.461

(partial model without unconserved sides chains):
PDB file : Tito_3VX4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VX4-query.scw
PDB file : Tito_Scwrl_3VX4.pdb: