Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSKLSILMIGFALSVLLAACGSNDAKEEKTDTGSKTEATASEGEELYQQSCVGCHGKDLEGVSGPNLQEVGGKYDEHKIESIIKNGR-----------------GNMPKGLVDD-NEAAVIAKWLSEKK
3CP5 Chain:A ((30-120))------------------------------------DAALAQQGEQLFNTYCTACHRLDERF-IGPALRDVTKRRGPVYIMNVMLNPNGMIQRHPVMKQLVQEYGTMMTDM-ALSEEQARAILEYLRQV-


General information:
TITO was launched using:
RESULT:

Template: 3CP5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 168 -5838 -34.75 -79.97
target 2D structure prediction score : 0.81
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -34.75
2D Compatibility (Sec. Struct. Predict.) : 0.81
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.476

(partial model without unconserved sides chains):
PDB file : Tito_3CP5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CP5-query.scw
PDB file : Tito_Scwrl_3CP5.pdb: