Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEAINATIQRILRTDRGI-----TANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDVYTSVAVWFPETAKPAPLGKGTA
2QNW Chain:A ((9-80))
-----LERVKDVVADQLGVDRARINPESNFIKDLDADSLDSVELVMAFEEKFGVSIPDEEASKIATVQDALSYIEKA---------------
General information:
TITO was launched using:
RESULT:
Template:
2QNW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39292 for 445 contacts (-88.3/contact) +
2D Compatibility (PS) -7078 + (NN) -838 + (LL) 1036
1D Compatibility (HY) -4800 + (ID) 750
Total energy: -51722.0 ( -116.23 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_2QNW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QNW-query.scw
PDB file :
Tito_Scwrl_2QNW.pdb
: