Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSDDELTGLDEFALLAENAEQAGVNGPLPEVERVQAGAISALRWGGSAPRVIFLHGGGQNAHTWDTVIVGLGE--PALAVDLPGHGHSAWREDGNYSPQLNSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQDTAELHRRATHFRGVHIVEKSGHSVQSDQPRALIEIVRGVLDTR |
3BF8 Chain:A ((1-255)) | MKLNIRAQTAQN---------------------------------QHNNSPIVLVHGLFGSLDNLGVLARDLVNDHNIIQVDVRNHGLSPREPVMNYPAM--AQDLVDTLDAQQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVR------RHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLLKS---FVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQARA-HVIAGAGHWVHAEKPDAVLRAIRRYLNDH |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3BF8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -144896 for 2162 contacts (-67.0/contact) +
2D Compatibility (PS) -27267 + (NN) -12104 + (LL) 3836
1D Compatibility (HY) -8800 + (ID) 2400
Total energy: -191631.0 ( -88.64 by residue)
QMean score : 0.406
|
|
|