Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGYN--------N-AVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQLRGA-GGLPSAAIGG--GVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNN------GNGARVQRVVGSAPAASLGIST-----------GDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA |
| 3QO6 Chain:A ((16-334)) | ------------------------------------------------ELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQGHIVTNYHVIRGASDLRV-TLADQTTFDAKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSADLLVGQKVFAIGNPFG--LDHTLTTGVISGLRREISSAAT---GRPI-QDVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSG-ASSGVGFSIPVDTVGGIVDQLVRFGKVT------RPILGIKFAPDQSVEQLGVSGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDHKE-KISVTLEPKP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QO6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143245 for 2442 contacts (-58.7/contact) +
2D Compatibility (PS) -32101 + (NN) -17880 + (LL) 4276
1D Compatibility (HY) -18400 + (ID) 4350
Total energy: -211700.0 ( -86.69 by residue)
QMean score : 0.461
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