Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAGNGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGGP
4R9K Chain:A ((18-148))
----GKASTPDEKIVLEFMDA----LTSNDAAKLIKYFAEDTMYQNMPLPPAYGRDAVEQTLAGLFKVMSI---DAVEVFHIGSSKG--LVFTERVDVLRALPTGKSYNLSILGVFQLT-DGKITGWRDYFDLREFEEAVDLPLR----------------------
General information:
TITO was launched using:
RESULT:
Template:
4R9K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48744 for 987 contacts (-49.4/contact) +
2D Compatibility (PS) -14395 + (NN) -10516 + (LL) 1936
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -73669.0 ( -74.64 by residue)
QMean score : 0.328
(partial model without unconserved sides chains):
PDB file :
Tito_4R9K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4R9K-query.scw
PDB file :
Tito_Scwrl_4R9K.pdb
: