Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASVSFEQATRRYPGTDRPALDRLDLIVGDGEFVVLVGPSGCGKTTSLRMVAGLETLDCGRIRI-GERDV-TEVDPKDRDVAMVFQNYALYPH-----MTVAQNMGFALKVAKIGKAEIRERVLAAAKL--LDLQSYLDRKPKDLSGGQRQRVAMGRAIVRRPQVFLMDEPLSNLDAKLRGQTR-NQIAALQRQLGTTTVYVTHDQVEAMTMGDRVAVLSDGVLQQCASPRELYRNPGNVFVAGFIGSPAMNLFRLSIADSTVSLGDWQILLPRAVVGTAAEVIIGVRPEHLELGGAGIEMDVDMVEELGADAYLYGRIVSGGCEMDQSIVARVDGRGPPERGSRVRLCPTPGHLHFFAVDGRRIPG |
4HLU Chain:B ((21-216)) | ----------------EKKALENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIEPTSGDVLYDGERKKGYEIR---RNIGIAFQ----YPEDQFFAERVFDEVAFAVKNFYPDRDPV-PLVKKAMEFVGLDFDSFKDRVPFFLSGGEKRRVAIASVIVHEPDILILDEPLVGLDRE--GKTDLLRIVEKWKTLGKTVILISHDIETVINHVDRVVVLEKG------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HLU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69214 for 1397 contacts (-49.5/contact) +
2D Compatibility (PS) -20970 + (NN) -11298 + (LL) 9716
1D Compatibility (HY) -14400 + (ID) 3350
Total energy: -109516.0 ( -78.39 by residue)
QMean score : 0.444
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