Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQHQRPDPMGPGSPRASARRPEPDPMGEPWWSRAVFYQVYPRSFADSNGDGVGDLDGLASRLDHLQQLGVDAIWINPVTVSPMADHGYDVADPRDIDPLFGGMPAFERLVAAAHRQGIKVTMDVVPNHTSSAHPWFQAALADLPGSPARDRYFFRDGRGPDGSLPPNNWESVFGGPAWTRVREPDGNPGQWYLHLFDTEQPDLNWDNPEILDDFEKTLRFWLDRGVDGFRIDVAHGMAKPPGLPDSPDLGIEVLHHRDDDPRFNHPNVHAIHRDIRTVIDEYPGAVTVGEVWVHDNARWAEYLRPD--ELHLGFNFRLARTEF------------DAAEIRDAVANSLAAAALQNATPTWTLANHDVGREVSRYGGG-EIGLRRAKAMAVVMLALPGVVFLYNGQELGLPDVDLP-DEVLQDPTWE----------------RSGRTERGRDGCRVPIPWSGNIPPFGFSTCPDTWLPMPPEWAALTAEKQRADAGSTLSFFRLALRLRRE-RNEFDGDVDWLAAP-DDALIFRRH--GGGLVCALNAAERPLALPAG---EPILASAPL----TDATLPPNAAAWLV |
| 4AIE Chain:A ((4-538)) | ----------------------------ASWWKNAVVYQVYPKSFQDSNGDGIGDLQGIISRLDYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEHHIKIVMDLVVNHTSDQHKWFVEAKKG-KDNQYRDYYIWRDPVDE---HEPNDLKSAFSGSAWKYDE----RSGQYYLHFFADQQPDLNWQNTELRQKIYNMMNFWLDKGIGGFRMDVIELIGKDPDKN----------------IRENGPMLHPYLQEMNKATFGKRDVMTVGETWNATPKIAEEYSDPDRHELSMVFQFENQSLDQQPGKEKWDLKPLDLGELKKVLVKWQTKIDFDHAWNSLFWENHDIPRVISRWGNDQEYRVQCAKMFAIILHMMHGTPYIFNGEEIGMTNCPVKNIDEVEDIESINMYNERLAEGYDEEELIHAINVKGRDNARRPMQWNDEK-NAGFSE-VDPWLSVNPNYKDINVENALADPNSIFYTYQKLIKLRHENPIVVDGDFSLVSNTQDAVLAYYRILNDKKWLVVANLSNEEQNFVSNDQIETILSNYPERNNVQNITLKPYEAFISK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AIE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179991 for 4279 contacts (-42.1/contact) +
2D Compatibility (PS) -53789 + (NN) -40601 + (LL) -228
1D Compatibility (HY) -32400 + (ID) 8550
Total energy: -315559.0 ( -73.75 by residue)
QMean score : 0.596
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