Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGESGAAAAPSITLNDEHTMPVLGLGV---AELSDDETERAVSAALEIGCRLIDTAYAYGNEAAVGRAI----AASGVAREELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWPAPPV-----------GKY----VD---AWGGMIQSRGEGHARSIGVSNFTAENIENLID---LTFVTPAVNQIELHPLLNQDELRKANAQHTVVTQSYCPLALGR-----------LLDNPTVTSIASEYVKTPAQVLLRWNLQLGNAVVVRSARPERIASNFDVFDFELAAEHMDALGGLNDGTRVREDPLTYAGT |
3C3U Chain:A ((7-304)) | -----------CVKLNDGHFMPVLGFGTYAPAEVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAVEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKY-KPVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGLNRNVR----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3C3U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -140816 for 2157 contacts (-65.3/contact) +
2D Compatibility (PS) -27925 + (NN) -10090 + (LL) 1144
1D Compatibility (HY) -22000 + (ID) 5350
Total energy: -205037.0 ( -95.06 by residue)
QMean score : 0.480
|
|
|