Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNPPWTVDVVVVGAGFAGLAAARELTRQGHEVLVFEGRDRVGGRSLTGRVAGVPADMGGSFIGPTQDAVLALATELGIPTTPTHRDGRNV-IQWRGSARSYRGTIPKLSLTGLIDIGRLRWQFERIARGVPVAAPWDARRARELDDVSLGEWLRLVRATSSSRNLMAIMTRVTWGCEPDD-VSMLHAARYVRAAGGLDRLLDVKNGAQQDRVPGGTQQIAQAAAAQLGARVLLNAAVRRIDRHGAGVTVTSDQGQAEAGFVIVAIPPAHRVAIEFDPPLPPEYQQLAHHWPQGRLSKAYAAYSTPFWRASGYSGQALSDEAPVFITFDVSPHADGPGILMGFVDARGFDS---LPIEERRRDALRCFASLFGDEALDPLDYVDYRWGTEEFAPGGPTAAVPPGSWTKYGHWLREPVGPIHWASTETADEWTGYFDGAVRSGQRAAAEVAALL |
| 3RHA Chain:A ((9-448)) | --------DVVIVGAGPSGLTAARELKKAGLSVAVLEARDRVGGRTWTDTIDGAMLEIGGQWVSPDQTVLMELLDELGLKMYSRYRDGESVYIGADGKRTQYTGDTFPVNETTKAEMDKLVAILDELAAEIGPTEPWAHPKARELDTISFHHWLRQNSNDEEACNNIGLFIAGGMLTKPAHAFSALQAVLMAASAGSFSHLTD-EDFILDKRVIGGMQQVSLLQAAELGDDVVLNSPVRTIKWDENGVSVVSERATVNARFVIMAVPPNLYSRVSFDPPLPRRQHQMHQHQSLGLVIKVHAVYDTPFWREEGLSGTGFSAGALVQEVYDNTNHGDSRGTLVGFVSDEKADAVFELSAEDRKKAILESIAGFLGDKALTPEVYYESDWGSEEWTRGAYASSYDLGGLHRYGKDQHANVGPIYWSSSDLAAEGYQHVDGAVRMGQATAARI---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RHA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212810 for 4017 contacts (-53.0/contact) +
2D Compatibility (PS) -46765 + (NN) -27327 + (LL) 1132
1D Compatibility (HY) -23600 + (ID) 8050
Total energy: -317420.0 ( -79.02 by residue)
QMean score : 0.478
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