Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQDVVDEILAAGGQAVADGSDISDWDQAANLIQAAVETYGGVDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAASHWRGLSKAGKAPKDIDARIINTSSGAGLQGSVGQGNYSAAKAGIAALTLVGAAEMRRYGVTVNAIAPA-ARTRMTETVFAEMMAK--PQEGFDAMAPENVSPLVVWLGS-AESRDVTGKVFEVEGGIIRVAEGWAHGPQVDKGVKWDPAELGPVVSDLLAKSRPPVPVYGA |
| 4DMM Chain:D ((29-267)) | ------RIALVTGASRGIGRAIALELAAAGAKVAVN---------YASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIM---------LKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIAT---------KLLEVIPLGRYGEAA--EVAGVVRFLAADPAAAYITGQVINIDGGLV------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DMM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96166 for 2009 contacts (-47.9/contact) +
2D Compatibility (PS) -24846 + (NN) -9771 + (LL) 3180
1D Compatibility (HY) -15200 + (ID) 4800
Total energy: -147603.0 ( -73.47 by residue)
QMean score : 0.465
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