Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQLPRVGLGTDVHPIEPGRPCWLVGLLFPSADGCAGHSDGDVAVHALCDAVLSAAGLGDIGEVFGVDDPRWQGVSGADMLRHVVVLITQHGYRVGNAVVQVIGNRPKIGWRRLEAQAVLSRLLNA---PVSVSATTTDGLGLTGRGEGLAAIATALVVSLR
1U3L Chain:A ((2-155))
-----RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLI---
General information:
TITO was launched using:
RESULT:
Template:
1U3L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138660 for 1293 contacts (-107.2/contact) +
2D Compatibility (PS) -16719 + (NN) -11673 + (LL) 532
1D Compatibility (HY) -10400 + (ID) 3200
Total energy: -180120.0 ( -139.30 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_1U3L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U3L-query.scw
PDB file :
Tito_Scwrl_1U3L.pdb
: