Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTIPAFHPGELNVYSAPGDVADVSRALRLTGRRVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGEDLDAYPRTPDDDLAQLRAEGVEIAFTPTTAAMYPDGLRTTVQ-PGPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNRYLDPAQRAAAVALSAALTAAAHAATAGAQA--ALDAARAVLDAAPGVAVDYLELRDIGLGP---MPLN---GSGRLLVAARLGTTRLLDNIAIEIGTFAGTDRPDGYRAILESHWRN |
1V8F Chain:A ((7-274)) | -------------------VAELRAALPREG--VGFVPTMGYLHRGHLALVERARR-ENPFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEAGVDLLFAPGVEEMYPEGFATRVQVEGPLTALWEGAVRPGHFQGVATVVARLFLLVQPQRAYFGEKDYQQLLVVRRMVRDLGFPVEVVGVPTVREEDGLALSSRNVYLSPETRKKAPVLYRALLAMREVAGQGGSVAEALRAGEEALRAVPEFRKDYLAI----VHPETLLPLSDWVAGARGIVAGRFPEARLIDNLEV------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V8F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194420 for 2091 contacts (-93.0/contact) +
2D Compatibility (PS) -29019 + (NN) -20137 + (LL) 1984
1D Compatibility (HY) -27200 + (ID) 6600
Total energy: -275392.0 ( -131.70 by residue)
QMean score : 0.745
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