Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIGHGYDVHRFGEGDFITLGGVRIPHKHGLVAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPRFKGADSRALLRHVVAIVAEKGWKVGNVDATIVAQAPKMAPHIETMRGLIAEDLGVAVDQVNVKATTTERLGFTGREEGIAVHAVALLMAR
3F0F Chain:B ((24-178))
FRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVV--
General information:
TITO was launched using:
RESULT:
Template:
3F0F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126046 for 1312 contacts (-96.1/contact) +
2D Compatibility (PS) -17041 + (NN) -12794 + (LL) 244
1D Compatibility (HY) -15600 + (ID) 4800
Total energy: -176037.0 ( -134.17 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_3F0F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F0F-query.scw
PDB file :
Tito_Scwrl_3F0F.pdb
: