Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGKRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPPHRET-PQVSAAQRLAMVERAVAGVERLTVDPRELQRDKPSYTIDTLESVRAELAADDQLFMLIGWDAFCGLPTWHRWEALLDHCHIVVLQRPDADSEPPESLRDLLAARSVADPQALKGPGGQITFVWQTPLAVSATQIRALLGAGRSVRFLVPDAVLNYIEAHHLYRAPH
2QTR Chain:A ((1-189))
-MRKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRNITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYP-DVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTP----------------------YPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYES--
General information:
TITO was launched using:
RESULT:
Template:
2QTR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141861 for 1488 contacts (-95.3/contact) +
2D Compatibility (PS) -20774 + (NN) -15357 + (LL) 1384
1D Compatibility (HY) -15600 + (ID) 3450
Total energy: -195658.0 ( -131.49 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_2QTR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QTR-query.scw
PDB file :
Tito_Scwrl_2QTR.pdb
: