Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METVLTARDLTRHYEVSRGLFKGHAQVRALNGVSFELEAGKTLAVVGESGCGKSTLARALTLIEEPTSGSLKIAGQEVKGASKDQRRQLRRDVQMVFQNPYASLNPRQKIGDQLAEPLLINTALSREERREKVQQ---MMRQVGLRPEHYQRYPH----MFSGGQRQRIALARAMMLQPKVLVADEPTSALDVS----IQAQVLNLFMDLQQQFRTAYVFISHNLAVVRHVADDVLVMYLGRPAEMGPADKLYENPLHPYTRALLSATPAIHPDPTKPKIRIQGELPNPLNPPEGCAFHKRCPYATERCRSEVPELRLLDQRQVACHHAEQFLG |
| 3NHB Chain:A ((70-270)) | -----------------------------LQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDI---SQVTQASLRSHIGVVPQDTVL-------FNDTIADNIRYGRVTAGNDEVEAAAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCAN-----RTTIV-VAHRLSTVVN-ADQILVIKDGCIVERG--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NHB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86909 for 1419 contacts (-61.2/contact) +
2D Compatibility (PS) -20513 + (NN) -8598 + (LL) 8200
1D Compatibility (HY) -11600 + (ID) 3400
Total energy: -122820.0 ( -86.55 by residue)
QMean score : 0.484
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