Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDLQQLFENNVRWAEAIKQEDPDFFAKLARQQTPEYLWIGCSDARVPANEIVGMLPGDLFVHRNVANVVLHTDLNCLSVIQFAVDVLKVKHILVTGHYGCGGVRASL--HNDQLGLIDGWLRSIRDLAYEYREHLEQLPTEEERVDRLCELNVIQQVANVSHTSIVQNAWHRGQSLSVHGCIYGIKDGLWKNLNVTVSGLDQLPPQYRLSPLGGCC
3UCJ Chain:A ((7-206))
-ADLSPLLEANRKWADECAAKDSTYFSKVAGSQAPEYLYIGCADSRVSPAQLFNMAPGEVFVQRNVGNLVSNKDLNCMSCLEYTVDHLKIKHILVCGHYNCGACKAGLVWHPKTAGVTNLWISDVREVRDKNAAKLHGL-SADDAWDKMVELNVEAQVFNVCASPIVQAAWARGQPLSVHGIVYTPGTGLVKELIKPITGME---------------
General information:
TITO was launched using:
RESULT:
Template:
3UCJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -147927 for 1441 contacts (-102.7/contact) +
2D Compatibility (PS) -20785 + (NN) -3664 + (LL) 348
1D Compatibility (HY) -22000 + (ID) 4350
Total energy: -198378.0 ( -137.67 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_3UCJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UCJ-query.scw
PDB file :
Tito_Scwrl_3UCJ.pdb
: