Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNPQYPTRLPCGSRVLDLARPHVMGILNVTPDSFSDGGRYDR-LDDALRHAERMVL-----EGATLIDVGGESTRPGARSVSPTEELERVAPVVERIARE-----LDVVISVDTSTPAVMRETARLGAGLINDVRSLQ-RDGALDAAVDS-GLAVCLMHMRGEPQTMQDAPAYQ----------------------------DVVAEVGAFLQERVDACVAAGIDRERLLLDPGFGFAKTLEHNLVLFRHLQALHG----------------LGLPLLVGVSRKSMIGKVLGR-EVDERLYGSLALAALALAKGARIIRVHDVAATVDVMRMISAVEMAD |
2BMB Chain:A ((222-543)) | ------------------VSPTYIMAIFNATPDSFSDGGEHFADIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRESTELPQDKVILSIDTYRSNVAKEAIKVGVDIINDISGGLFDSNMFAVIAENPEICYILSHTRGDISTMNRLAHYENFALGDSIQQEFVHNTDIQQLDDLKDKTVLIRNVGQEIGERYIKAIDNGVKRWQILIDPGLGFAKTWKQNLQIIRHIPILKNYSFTMNSNNSQVYVNLRNMPVLLGPSRKKFIGHITKDVDAKQRDFATGAVVASCIGFGSDMVRVHDVKNCSKSIKLADAIYKG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BMB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154405 for 2224 contacts (-69.4/contact) +
2D Compatibility (PS) -29462 + (NN) -21207 + (LL) 392
1D Compatibility (HY) -17200 + (ID) 4150
Total energy: -226032.0 ( -101.63 by residue)
QMean score : 0.544
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