Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGAQMNKIEVKNVFKIFGPRADAALALIRQGRSKGEVLAQTGCVVGVNDLSLSIGAGEIFVIMGLSGSGKSTLVRHFNRLIDPTSGEILVDGEDILRYDMEALRQFRRRKISMVFQSFGLLPHKSVLDNVAY---GLKVRGESRAQCHERALHWIATVGLKGYEKSYPHQ---LSGGMRQRVGLARALAADTEIILMDEAFSALDPLIRADMQDQLLELQKTLHKTIVFITHDLDEAVRIGNRIAILKDGQLIQVGTPREILHQPADDYVDRFVQRRVANL |
2FF7 Chain:A ((25-238)) | -----------------------------------------------LDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWL----RRQVGVVLQDNVLL-NRSIIDNISLANPGMSVEKVIYAAKLAGAHDFISEL-REGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICKG--RTVIIIAHRL-STVKNADRIIVMEKGKIVEQGKHKELLSEPESLY------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2FF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -113399 for 1581 contacts (-71.7/contact) +
2D Compatibility (PS) -22159 + (NN) -5334 + (LL) 4988
1D Compatibility (HY) -17200 + (ID) 3700
Total energy: -156804.0 ( -99.18 by residue)
QMean score : 0.487
|
|
|