Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGDKLLSELGYKLGRTIGEGSYSKVKVATSKKYKGTVAIKVVDRRRAPPDFVNKFLP-----RELSILRGVRHPHIVHVFEFIEVCNGKLYIVME-AAATDLLQAVQRNGRIPGVQARDLFAQIAGAVRYLHDHHLVHRDLKCENVLLSPDERR--VKLTDFGFGRQAHGYPDLSTTYCGSAAYASPEVLLGI---PYDPKKYDVWSMGVVLYVMVTGCMPFDDSDIAGLPRRQKRGVLY---PE-GLELSERCKALIAELLQFSPSARPSAGQVARNCWLRAGDSG |
| 4BDI Chain:A ((18-288)) | -----------YIMSKTLG----GEVKLAFERKTCKKVAIKIISK-------------ALNVETEIEILKKLNHPCIIKIKNFFDAED--YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYN-RAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BDI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144838 for 1694 contacts (-85.5/contact) +
2D Compatibility (PS) -25827 + (NN) -11385 + (LL) 760
1D Compatibility (HY) -22400 + (ID) 4350
Total energy: -208040.0 ( -122.81 by residue)
QMean score : 0.407
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