Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRTPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAIQLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLK---SVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLKVEDFVQLLEGAK
4MKN Chain:A ((22-264))----FVGGNWKCNGSVANVAKLVDELNAGTIPRGVDVVVAPPFIYIDYVMQHLDRDKYQ---LSAQNAWIGGNGAFTGEVSAEQLTDFGVPWVILGHSERRSLFGESNEVVAKKTSHALAAGLGVIACIGETLEQRNSGSVFKVLDAQMDALV-----DEVKDWTKVVLAYEPVWAIGTGVVASPEQAQEVHAYLRQYCAKKLGAAVADKLRIIYGGSVSDTNCKDLSKQEDIDGFLVGGASLKGAAFVTICNAA-


General information:
TITO was launched using:
RESULT:

Template: 4MKN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81738 for 2013 contacts (-40.6/contact) +
2D Compatibility (PS) -26109 + (NN) -10410 + (LL) 616
1D Compatibility (HY) -22000 + (ID) 5150
Total energy: -144791.0 ( -71.93 by residue)
QMean score : 0.535

(partial model without unconserved sides chains):
PDB file : Tito_4MKN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MKN-query.scw
PDB file : Tito_Scwrl_4MKN.pdb: