Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLSKGLENVYVAETSISSIIDD--MLTYVGYGIDDLMENNASFEEVIYLLWHLRLPNKDEFKKFKREIQENMAVSETIITSLRMQNHQKLHPMSVLRTTVSMLGVFDTEAELDDG-----EAVYRKGLRLQAKMPTIVAAFSRIRRGLDPIPPREDLNMAANFLYMITGEEADELSVEAMNKALVLHADHEFNASTFTARVCVATLSDVYSGVTAAIGALKGPLHGGANERVFDMLEEIDQ-AGDVRNYIQEKIDTKQKIMGFGHRVYRGGDPRAQHLREMSRKLTAEKGEEKWFDISLQVEESVWEL---KHLKPNVDFYSASVYHALGIDRDLFTLVFSVSRVSGWLAHIFEQYRDNRLIRPRAIYVGPENRSYLPVEERI |
| 1AJ8 Chain:A ((1-371)) | --LAKGLEDVYIDQTNICYIDGKEGKLYYRGYSVEELAE-LSTFEEVVYLLWWGKLPSLSELENFKKELAKSRGLPKEVIEIMEALPKNT-HPMGALRTIISYLGNIDDSGD----IPVTPEEVYRIGISVTAKIPTIVANWYRIKNGLEYVPPKEKLSHAANFLYMLHGEEPPKEWEKAMDVALILYAEHEINASTLAVMTVGSTLSDYYSAILAGIGALKGPIHGGAVEEAIKQFMEIG-SPEKVEEWFFKALQQKRKIMGAGHRVYKTYDPRARIFKKYASKLGD----KKLFEIAERLERLVEEYLSKKGISINVDYWSGLVFYGMKIPIELYTTIFAMGRIAGWTAHLAEYVSHNRIIRPRLQYVGEIGKKYLPIELRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AJ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204294 for 3023 contacts (-67.6/contact) +
2D Compatibility (PS) -38202 + (NN) -13838 + (LL) 428
1D Compatibility (HY) -33600 + (ID) 7850
Total energy: -297356.0 ( -98.36 by residue)
QMean score : 0.512
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