Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEILIAGGSGFLGKQIIKAALTKGHKVAYLSRHEGKGDI---------FKDPRLTYIRGDITEADKIHLEDRTFDILIDCIGAIKPNQ--LDELNVKATQKAVALCHKN-QIPKLVYISANS--G------------------------Y--SAYIKSKRKAEQIIKAS----GLDYLFVRPGLMYGEE-RPL-SIFQAKCIKLFSHLPFLGIVVQKVFPTKVVIVAEAIVTTLRKKPTQKILSIEELNNK
2P4H Chain:X ((6-252))
GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRAD----RDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFHTASPI----EIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKK-EQIGVTRFHMVHVDDVARAHIYLLENSVPGGRYNCSPFIVP
General information:
TITO was launched using:
RESULT:
Template:
2P4H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101771 for 1478 contacts (-68.9/contact) +
2D Compatibility (PS) -20233 + (NN) -11122 + (LL) -260
1D Compatibility (HY) -7200 + (ID) 2000
Total energy: -142586.0 ( -96.47 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_2P4H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P4H-query.scw
PDB file :
Tito_Scwrl_2P4H.pdb
: