Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFNDIPVFDYEDIQLIPNKCIISSRSQADTSVKLG-NYTFKLPVIPANMQTIIDEEVAETLACEGYFYIMHR-FNEEERKPFIKRMH-DKGLIASISVGVKDYEYDFVTSLKEDAPEFITIDIAHGHSNSVIEMIQHIKQELPETFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKVKTGFGTGGWQLAALRWCSKAARK---PIIADGGIRTHGDIAKSIRFGASMVMIGSLFAGHLESPGKLVEVDGQQFKEY--YGSASEYQKGEHKNVEGKKILLPVKGRLEDTLTEMQQDLQSSISYAGGKELDSLRHVDYVIVKNSIWNGDSI |
| 4QQ3 Chain:A ((14-333)) | -------LTFDDVLLVPAHSTVLPNT-ADLRTRLTKNIALNIPMVSASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVKISGGLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGV--PQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAP-------GRSYKAYRGMG---------------R---IAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTKAQFVRISGA------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4QQ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -164318 for 2499 contacts (-65.8/contact) +
2D Compatibility (PS) -30241 + (NN) -9897 + (LL) 2340
1D Compatibility (HY) -16800 + (ID) 4850
Total energy: -223766.0 ( -89.54 by residue)
QMean score : 0.511
|
|
|