Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALKSLVLLSLLVLVLLLVRVQPSLGKET-AAAKFERQHMDSSTSAASSSNYCNQMMKSRNLT-KDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV
2P7S Chain:A ((5-111))
----------------------------DREWEKFKTKHI-TSQ--SVADFNCNRTMNDPAYTPDGQCKPINTFIHSTTGPVKEICRRA-TGRVN-----KSSTQQFTLTTCKNP----IR-CKYSQSNTTNFICITCRDN--YPVHFVKT-
General information:
TITO was launched using:
RESULT:
Template:
2P7S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27782 for 733 contacts (-37.9/contact) +
2D Compatibility (PS) -11405 + (NN) -5264 + (LL) 3140
1D Compatibility (HY) -7200 + (ID) 1500
Total energy: -50011.0 ( -68.23 by residue)
QMean score : 0.300
(partial model without unconserved sides chains):
PDB file :
Tito_2P7S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P7S-query.scw
PDB file :
Tito_Scwrl_2P7S.pdb
: