Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
FPTDDDDKIVGGYTCAANSIPYQVSLNSG--SHFCGGSLINSQWVVSAAHCY--KSRIQVRLGEHNIDVLEGNEQFINAAKIITHPNFNGNTLDNDIMLIKLSSPATLNSRVATVSLPRSCAAAGTECLISGWGNTKSSGSSYPSLLQCLKAPVLSDSSCKSSYPGQITGNMICVGFLEGGKDSCQGDSGGPVVCNGQLQGIVSWGYGCAQKNKPGVYTKVCNYVNWIQQTIAAN
1FXY Chain:A ((1-227))
--------IVGGYNCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPASLPTAPPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDSGGPVVCNGQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTIAAN
General information:
TITO was launched using:
RESULT:
Template:
1FXY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -151863 for 1887 contacts (-80.5/contact) +
2D Compatibility (PS) -24439 + (NN) -11308 + (LL) -196
1D Compatibility (HY) -23200 + (ID) 6550
Total energy: -217556.0 ( -115.29 by residue)
QMean score : 0.798
(partial model without unconserved sides chains):
PDB file :
Tito_1FXY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FXY-query.scw
PDB file :
Tito_Scwrl_1FXY.pdb
: