Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------MENRNNMTEFVLLGLTEN-PKMQKIIFVVFFVIYIITVVGYV-----LIVVTITASPSLGSPMYLSLAYLSFIDACYSSVNTPNLITHSLYGKKAILFNGCMTQVFGEHFFGGAEGILLTVMAYDHYVAICKPLHYMTIMNQCVCALLMGVVWMGGFLHATIQILFIFQLPFCGPNVIDHFMCDLNP---LLNLACTDTHMLELFIAANSGFICLLNFALLLVSYVVILCSLRTHSLEARHKALSTCVSHITVVI----LFFVPCIFVYMRP-------AATLPIDKAVA-----IF------YTMITPMLNPLIYTLKNAQMKNAIRKLCSRKDISGDK------------------------------------------------------------ |
| 3F8T Chain:A ((18-492)) | RIGEVASRFGLPTRVLIEIVRTESFQRSLARVTSGKPVVLDLRELDSDLASWIATHARLVEPALRELVRTVAPDVEPRVRFRGLPHRFRRVERIRPMDGALISIEGVVREVRGAERLEHAIVDTGSELVAVRLHGHRLGPGLRVEILGIVRSATLDALEVHKKDPIPEVHPDPAELEEFRELADKDPLTTFARAIA-----PLPGAEEVGKMLALQLFSCV---GKNSERLHVLLAGY-PVVCSEILHHVLDHLAPRGVYVDLRRTELTDLTAVLKEDRGWALRAG-AAVLADGGILAVDHLEGAPEPHRWALMEAMDKGTVTVDGIALNARCAVLAAINPGEPSDPPIARIDLDQDFLSHFDLIAFLGVPSYTLLRRYLLYAIREHPAPELTEEARKRLEHWYETRREEVEERLGMGLPTLPVTRRQLESVERLAKAHARMRLSDDVEPEDVDIAAELVDWYLETAMQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3F8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -381123 for 2218 contacts (-171.8/contact) +
2D Compatibility (PS) -31821 + (NN) 1629 + (LL) 1160
1D Compatibility (HY) -1600 + (ID) 2500
Total energy: -414255.0 ( -186.77 by residue)
QMean score : 0.168
|
|
|