Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEDSSALPWSINRDDYELQE-----VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVL--DESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGE-DGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQ-VRGYDFKADIWSFGITAIELATGAAPYHKY-----PPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEFLQEKTLQRAPTISERAKKVRRVPGSSGRLHKTEDGGWEWSDDEFDEESEEGKAAISQLRSPRVKESISNSELFPTTDPVGTLLQVPEQISAHLPQPAGQIATQPTQVSLPPTAEPAKTAQALSSGSGSQETKIPISLVLRLRNSKKELNDIRFEFTPGRDTAEGVSQELISAGLVDGRDLVIVAANLQKIVEEPQSNRSVTFKLASGVEGSDIPDDGKLIGFAQLSIS |
| 4BIC Chain:B ((15-282)) | ---------------DYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIP-ER----SQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRS-------KWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA--------------TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIP---------ESMSAEAKAF---ILKCFEPDPDKRACANDLLVDEFLKVS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BIC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -127573 for 1886 contacts (-67.6/contact) +
2D Compatibility (PS) -25931 + (NN) -10816 + (LL) 15684
1D Compatibility (HY) -18800 + (ID) 4750
Total energy: -172186.0 ( -91.30 by residue)
QMean score : 0.464
|
|
|