Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIRVGINGLGRIGRSVLRAIHEVGKYNEQIEVVAVNGSLSTEQHAHLIRYDSVHGKFNGDIGFNESENWISTNGKKFSLYRERNPENIPW---DVDVVLECTGAFNKRAEAAKH---NTGKVIVSAPVSDADI-TIVYGVNNDMLKKE-HKVISAGSCTTNCLAPVVKVLHFNLDMKSGFMTTVHAYTNDQNVLDGNHRDLRRARACGLSIVPTTTGAAKTIGSVIPELKGKLDGTAIRVPVANVSMVDLKFTTDKKVTAKEINEIF----KNSVNDVLSICKEPLVSIDFVHNPYSAIVDLAGTYVT-GDICRVAAWYDNEWAFSLRMLDIALLCYNRI
2DUU Chain:Q ((1-336))MTIRVAINGFGRIGRNFLRCWF--GRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDE--NSITVNGKTMKIVCDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTTNCLAPVAKVLHDNFGIIKGTMTTTHSY----------------ARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVPTPNVSVVDLVVQVEKPTITEQVNEVLQKASQTTMKGIIKYSDLPLVSSDFRGTDESSIVDSSLTLVMDGDLVKVIAWYDNEWGYSQRVVDLAELAARKS


General information:
TITO was launched using:
RESULT:

Template: 2DUU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -244356 for 2648 contacts (-92.3/contact) +
2D Compatibility (PS) -33557 + (NN) -13104 + (LL) 792
1D Compatibility (HY) -28000 + (ID) 7600
Total energy: -325825.0 ( -123.05 by residue)
QMean score : 0.534

(partial model without unconserved sides chains):
PDB file : Tito_2DUU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DUU-query.scw
PDB file : Tito_Scwrl_2DUU.pdb: