Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITYDLIGNTPLVLLEHYSDD-KVKIYAKLEQWNPGGSVKDRLGKYLVEKAIQEGRVRAGQT-IVEATAGNTGIGLAIAANRHHLKCKIFAPYGFSEEKINIMIALGADVSRTSQSEGMHGAQLAARSYAEKYGAVYM-NQFESEHNPDTYFHTLGPELTSALQ-QIDYFVAGIGSGGTFTGTARYLKQHH--VQCYAVEP-EGSVLNGGPAHAHDTEGIGSEKWPIFLERRLVDGIFTIKDQDAFRNVKSLAINEGLLVGSSSGAALQGALNLKAQLSEGT---IVVVFPDGSDRYMSKQIFNYEENDYE |
| 3VBE Chain:A ((32-328)) | -----LIGRTPLVYLNKVTEGCGAYVAVKQEMMQPTASIKDRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVLNGGKPGPHHITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISSGANTVAALRL-AQLPENKGKLIVTVHPSFGERYLSSVLF-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VBE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111224 for 2563 contacts (-43.4/contact) +
2D Compatibility (PS) -31324 + (NN) -7034 + (LL) 804
1D Compatibility (HY) -16400 + (ID) 5400
Total energy: -170578.0 ( -66.55 by residue)
QMean score : 0.383
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