Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPHINAKIGDFYPQCLLCGDPLRVSYIAKNFLQDAKEITNVRNMLGFSGKYKGKGISLMGHGMGIASCTIYVTELIKTYQVKELLRIGTCGAISPKVGLKDIVMATGASTDSKTNRVRFLNHDLSATPDFELSLRAYQTAKRLGIDLKIGNVFSSDFFYSFETHAFGLMAQYNHLAIEMEAAGLYATAMELNAKALCLCSVSDHLITKEALSPKERIESFDNMITLALEMMS
1OUM Chain:A ((2-230))
-TPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGVGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALESVL
General information:
TITO was launched using:
RESULT:
Template:
1OUM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -191947 for 1996 contacts (-96.2/contact) +
2D Compatibility (PS) -23819 + (NN) -5401 + (LL) 208
1D Compatibility (HY) -24000 + (ID) 6150
Total energy: -251109.0 ( -125.81 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_1OUM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OUM-query.scw
PDB file :
Tito_Scwrl_1OUM.pdb
: