Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGLTKIEIITRPNRFHLFQKELAKIGVSGLTVTKALGTGLEKGFIELYRGTKKESNIHERMKIEIVVSTVPVEDVLRVVKETLRTGEPGDGKVFIYPLAEVVKISTGETGIDALQDKPSK
4CO5 Chain:A ((7-108))
---------IIKPFKLDEVREALTSLGIQGLTVSEVKGFG----QTEIYRGAEYSVSFLPKVKVEVAVSDDQYEQVVEAIQKAANTGRIGDGKIFVLDIAQAVRIRTGETN----------
General information:
TITO was launched using:
RESULT:
Template:
4CO5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30197 for 544 contacts (-55.5/contact) +
2D Compatibility (PS) -10981 + (NN) -5454 + (LL) 1436
1D Compatibility (HY) -6800 + (ID) 1700
Total energy: -53696.0 ( -98.71 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_4CO5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CO5-query.scw
PDB file :
Tito_Scwrl_4CO5.pdb
: