Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIFVWAQDRAGNIGKDNKMPWHLPGDLQFFKKTTTGKTLVMGRKTYESLGKALPNRKTIVLTRDQGLKLDDAEILHSKEAVLALAETGEPIYIVGGAEIYRLFMDVADQLIVTKIDAEFEADTAFPEVDWENFSEVAKEFHEKDEKNKYNYTFYTYERN
3IA4 Chain:D ((5-160))
-MIAALANNRV--IGLDNKMPWHLPAELQLFKRATLGKPIVMGRNTFESIGRPLPGRLNIVLSRQTDYQPEGVTVVATLEDAVVAAGDVEELMIIGGATIYNQCLAAADRLYLTHIELTTEGDTWFPDYEQYNWQEIEHESYAADDKNPHNYRFSLLER-
General information:
TITO was launched using:
RESULT:
Template:
3IA4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100698 for 1153 contacts (-87.3/contact) +
2D Compatibility (PS) -16613 + (NN) -4327 + (LL) -124
1D Compatibility (HY) -12000 + (ID) 3300
Total energy: -137062.0 ( -118.87 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_3IA4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IA4-query.scw
PDB file :
Tito_Scwrl_3IA4.pdb
: